Project measure / variable:   Gould2   FC_preCS_chr_12

ID, description, units MPD:47162   FC_preCS_chr_12   chronic group, cued fear: pre-cue   [%]  nicotine  
nicotine study
Data set, strains Gould2   inbred   8 strains     sex: m     age:
Procedure fear conditioning test
Ontology mappings

  STRAIN COMPARISON PLOT
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Gould2 - chronic group, cued fear: pre-cue nicotine



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means4.38   %
Median of the strain means1.40   %
SD of the strain means± 8.31
Coefficient of variation (CV)1.90
Min–max range of strain means0   –   24.4   %
Mean sample size per strain9.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 4826.6428 689.5204 35.8196 < 0.0001
Residuals 71 1366.738 19.2498


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 5.02 5.53   10 1.75 1.1 0.08
A/J m 24.4 9.5   10 3.0 0.389 11.1, 44.4 2.41
BALB/cByJ m 0.0 0.0   9 0.0 0.0 -0.53
C3H/HeJ m 2.79 3.94   10 1.24 1.41 -0.19
C57BL/6J m 0.0 0.0   10 0.0 0.0 -0.53
CBA/J m 2.79 3.94   10 1.24 1.41 -0.19
DBA/1J m 0.0 0.0   10 0.0 0.0 -0.53
DBA/2J m 0.0 0.0   10 0.0 0.0 -0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 5.02 1.3874 7.7865 2.2535
A/J m 24.44 1.3874 27.2065 21.6735
BALB/cByJ m 0.0 1.4625 2.9161 -2.9161
C3H/HeJ m 2.79 1.3874 5.5565 0.0235
C57BL/6J m 0.0 1.3874 2.7665 -2.7665
CBA/J m 2.79 1.3874 5.5565 0.0235
DBA/1J m 0.0 1.3874 2.7665 -2.7665
DBA/2J m 0.0 1.3874 2.7665 -2.7665




  GWAS USING LINEAR MIXED MODELS